Class: ProjectionStructureUnionize
- Inherits:
-
ActiveRecord::Base
- Object
- ActiveRecord::Base
- ProjectionStructureUnionize
- Includes:
- CoreBase
- Defined in:
- app/models/projection_structure_unionize.rb
Overview
Projection expression statistics for a structure in a section_data_set.
Attributes:
- is_injection (Boolean)
-
sum_pixels
(Float)
—
Total number of pixel within domain. Include all pixels regardless of segmentation results.
-
sum_projection_pixels
(Float)
—
Total sum of "projection" (detected) pixels within domain.
-
sum_pixel_intensity
(Float)
—
Total sum of pixel intensity within domain. Includes all pixels regardless of segmentation results.
-
sum_projection_pixel_intensity
(Float)
—
Total sum of "projection" (detected) pixel intensity within domain.
-
projection_density
(Float)
—
Total sum of "projection" (detected) pixels within domain / Total sum of pixels within domain
-
projection_intensity
(Float)
—
Total sum of "projection" (detected) pixel intensity within domain / Total sum of "projection" (detected) pixels
-
projection_energy
(Float)
—
Total sum of "projection" (detected) pixel intensity within domain / Total sum of pixels within domain
-
volume
(Float)
—
(summed pixels) * resolution * resolution * z-sampling * 1e-9
-
projection_volume
(Float)
—
(summed projection pixels) * resolution * resolution * z-sampling * 1e-9
-
normalized_projection_volume
(Float)
—
projection_volume / (volume of outlined injection site)
-
max_voxel_density
(Float)
—
maximum voxel density within domain
-
max_voxel_x
(Float)
—
maximum density voxel x coordinate in microns
-
max_voxel_y
(Float)
—
maximum density voxel y coordinate in microns
-
max_voxel_z
(Float)
—
maximum density voxel z coordinate in microns
Associations:
-
section_data_set
(SectionDataSet)
—
the section_data_set over which the projection expression statistics were computed
-
structure
(Structure)
—
the structure over which the projection expression statistics were computed
-
hemisphere
(Hemisphere)
—
the hemisphere over which the projection expression statistics were computed