Class: Atlas

Inherits:

ActiveRecord::Base

Object
ActiveRecord::Base
Atlas

show all

Includes:

CoreBase

Defined in:

app/models/atlas.rb

Overview

An atlas is a set of SectionImage from a common ancestor specimen annotated with drawings using a particular onotology. Typically only a small sub-set of SectionImages from a Specimen will be annotated.

Attributes:

name (String) —

Name of the atlas

Associations:

structure_graph (StructureGraph) —

Structure graph used to annotated this atlas
specimen (Specimen) —

Specimen to which this atlas belongs
treatment (Treatment) —

Treatment of the SectionImages in this atlas
graphic_group_labels (GraphicGroupLabel) —

Drawing layers associated with this atlas
reference_space (ReferenceSpace) —

Reference space to which this atlas belongs
atlas_data_sets (AtlasDataSet) —

This atlas has and belongs to many atlas data sets
ish_canonical_blocks (IshCanonicalBlock) —

This atlas has many ish canonical blocks

Instance Method Summary (collapse)

- (Object) reference_to_image(rx, ry, rz)

Find the closest image and (x,y) to user specified 3D location.

Instance Method Details

- (Object) reference_to_image(rx, ry, rz)

Find the closest image and (x,y) to user specified 3D location

# File 'app/models/atlas.rb', line 31

def reference_to_image( rx, ry, rz )

  # TODO: for now just use the first data_set
  atlas_data_sets[0].reference_to_image( rx, ry, rz )
end